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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015868409.1_cds_XP_016433454.1_29611
CDS Infomation

[gene=LOC107759951] [db_xref=GeneID:107759951] [protein=protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like] [protein_id=XP_016433454.1] [location=complement(join(18046..18638,18737..18854))] [gbkey=CDS]
Sequence

ATGGATTCAACATCCAGGGTTGGAGCATCCAACCCGAACAATAATGGTGGTGGTGGAGGT
GGAGGAGGAGAGGGTCCATCATCAGCAACTGCAAGTGGTCGGATCACTGAGAGTGAAGGA
GGATCTGCGGCTCCTGCAGCACCACCGAGCCGCTACGAGTCACAAAAGCGTCGAGACTGG
AACACTTTCTTACAGTACCTAAGGAACCACAAGCCACCATTAACCCTAGCCCGCTGCAGT
GGAGCTCACGTGATCGAGTTCCTAAAATACCTCGATCAGTTCGGGAAGACGAAGGTGCAC
GTGACCGGGTGCCCTTATTTCGGGCACCCGAATCCACCAGCACCATGTGCGTGTCCGTTG
AAACAGGCTTGGGGTAGCCTTGATGCCCTAATTGGAAGGCTAAGAGCTGCTTATGAAGAA
AATGGAGGAAAGCCTGAATCAAACCCTTTTGGTGCTAAAGCTGTTAGAATATATTTAAGG
GAAGTTAGAGAAAGTCAAGCTAAAGCTAGAGGAATACCTTATGAAAAGAAGAAACGCAAA
CGGCCAAGTTCAAGTACGGTCACAGCTGGCAGCAGCGCTAGCAGCGGCGGTGTTATTGCA
GTAGAAGGCGGTGGTAGTGGTGGAGGAGATGGTGGAGGTAATGCTGGTGATGGCAGTGGC
GGCGGCGCTGCTATTGGTCCGCCACCTACTGCTACTAATCCAACAGAATAG

Peptide Sequence

PEP ID

XP_016433454.1
PEP Infomation

PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Nicotiana tabacum]
Sequence

MDSTSRVGASNPNNNGGGGGGGGEGPSSATASGRITESEGGSAAPAAPPSRYESQKRRDW
NTFLQYLRNHKPPLTLARCSGAHVIEFLKYLDQFGKTKVHVTGCPYFGHPNPPAPCACPL
KQAWGSLDALIGRLRAAYEENGGKPESNPFGAKAVRIYLREVRESQAKARGIPYEKKKRK
RPSSSTVTAGSSASSGGVIAVEGGGSGGGDGGGNAGDGSGGGAAIGPPPTATNPTE

Transcript Sequence

Gene sequence data has not been registered.